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Alpha-1 antitrypsin deficiency and liver disease

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Escalate

Neonatal cholestasis with coagulopathy or hypoglycaemia, or any adult with new encephalopathy, gastrointestinal bleeding, sepsis, tense ascites or acute kidney injury on chronic A1AT liver disease, needs urgent liver-centre assessment. Sudden severe breathlessness, hypoxia or chest pain follows standard respiratory and thromboembolic emergency pathways. A low A1AT level does not explain acute deterioration by itself; investigate infection, alcohol, drug injury, viral hepatitis, obstruction and other causes rather than anchoring on the genotype.

Synopsis

Identify alpha-1 antitrypsin deficiency across liver and lung phenotypes, confirm genotype and prevent avoidable cofactors while staging complications.

  • Alpha-1 antitrypsin is produced mainly by hepatocytes and protects lung connective tissue from neutrophil elastase.
  • The common Z variant misfolds and polymerises within hepatocytes, causing toxic gain-of-function liver injury while low circulating protein creates loss-of-function lung risk.
  • Severe Pi*ZZ disease can present as neonatal cholestasis, childhood fibrosis or adult cirrhosis and hepatocellular carcinoma, with widely variable penetrance.

Key red flags

Neonatal hepatic presentation

Prolonged conjugated jaundice, hepatomegaly, pale stool, poor growth or coagulopathy occurs in infancy after urgent obstructive and metabolic causes are considered.

Investigation priorities

01
Serum alpha-1 antitrypsin concentrationFirst step

Screen for reduced circulating protein in unexplained liver or early lung disease.

Management branches

ConfirmationMove from level to genotype

A1AT is low or clinical suspicion remains despite a borderline concentration.

  1. Check CRP, liver synthesis and protein-loss context and repeat a potentially inflammation-confounded concentration when appropriate.
  2. Request phenotype or common SERPINA1 genotyping under the current NHS pathway and seek broader analysis if results do not explain the level or phenotype.

Key medicines

Licensed smoking-cessation pharmacotherapySelect nicotine replacement, varenicline, cytisinicline or another current NICE-supported option at its BNF regimen according to dependence, contraindications, pregnancy and local service availability, combined with behavioural support.
Inhaled COPD therapyUse short- and long-acting bronchodilator or inhaled corticosteroid combinations only according to the current NICE NG115 symptom, exacerbation and spirometry pathway, with inhaler teaching and review.
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Sources and review status5 sources · checked 27 Aug 2026 · clinical review pending
Sources

Sources and review status

National guidance is shown before implementation-dependent detail. Typical adult dose examples remain subject to patient factors, contraindications and the live BNF or specialist protocol. Source check completed 27 Aug 2026; clinical approval remains outstanding.

Authoring stateRapid draftClinical stateAwaiting reviewJurisdictionUnited Kingdom